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Difference in S_ALR_87012172 & FAGLL03

Hi Gurus, 

We have an issue that total balance of the two reports S_ALR_87012172 & FAGLL03 are not matching.  This is because of alternative recon.account maintained with respect to GL maintained in customer master. Therefore, whenever posting done from SD side, alternative recon,account getting hit and altemately this alternative recon.account amount reflecting in main GL account which is maintained in customer master in the S_ALR_87012172(customer balances in local currency) only.  This is not the case for FAGLL03 report, hence there is difference in the report balances.  But now my concern is I would like to add a "GL account"field in the dynamic selection screen of report S_ALR_87012172, so that user can view both GL accounts balances separately(please see the attached screen shot for better understanding)

Thanks in advance.

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