Guess you are trying to use F-28 (or something similar) to post the incoming payment. That will not allow what you want to do - split the incoming payment across two company codes.
Try the generic FI txn - F-02 (or something similar), and simply choose a different company code for the credit line items.
Dr Incoming Cash 100
. Cr Customer 1 in Co Code A 80
. Cr Customer 2 in Co Code B 20
The obvious complication here is that you won't be able to pick open invoices for the customers. You might have to knock off the open invoice items against these credit line items in a separate txn (F-32).
Try it out and see if this suffices.
Rgds
Gulshan
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