in general there is not problem with the Change Request Management configuration on 3.2 and the later upgrade to 4.0. Only the project cycles should be closed before you perform the upgrade. Later on you can just regenerate them. Since ChaRM in 4.0 offers more functionality I would also recommend to start right away with 4.0.
In your situation, any way you haven't configured ChaRM in SolMan 3.2. So, you can first upgrade this system to 4.0 then configure ChaRM. I think this is the best way, instead of calling problems with upgrading after configuring.
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